Entry - #614257 - CHROMOSOME 20q11-q12 DELETION SYNDROME - OMIM - (MIRROR)

# 614257

CHROMOSOME 20q11-q12 DELETION SYNDROME


Other entities represented in this entry:

INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 11, INCLUDED; MRD11, INCLUDED
MENTAL RETARDATION, AUTOSOMAL DOMINANT 11, INCLUDED

Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
20q11.23 ?Intellectual developmental disorder, autosomal dominant 11 614257 AD 3 EPB41L1 602879
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
GROWTH
Other
- Intrauterine growth retardation
- Poor overall growth
HEAD & NECK
Head
- Microcephaly
- Plagiocephaly
Face
- Dysmorphic facial features
- Triangular face
- Flat face
- Round face
- Large forehead
- Frontal bossing
- Microretrognathia
- Midface hypoplasia
- Well-defined philtrum
- Prominent philtrum
- Prognathism
Ears
- Low-set ears
- Abnormally shaped ears
- Protruding ears
- Hearing loss (in some patients)
Eyes
- Deep-set eyes
- Downslanting palpebral fissures
- Hypertelorism
- Epicanthal folds
- Strabismus
- Arched eyebrows
- Narrow palpebral fissures
- Retinopathy (in some patients)
Nose
- Wide nasal bridge
- Prominent nasal bridge
- Long nasal ridge
- Broad nasal tip
- Hypoplastic alae nasi
- Long columella
Mouth
- Thin lips
- Cleft palate
CARDIOVASCULAR
Heart
- Cardiac defects (in some patients)
- Patent foramen ovale
- Hypertrophic cardiomyopathy
ABDOMEN
Gastrointestinal
- Feeding difficulties
- Gastroesophageal reflux
- Tube feeding
SKELETAL
Hands
- Camptodactyly
- Brachydactyly
- Fifth finger clinodactyly
- Preaxial polydactyly
- Adducted thumbs
Feet
- Brachydactyly
- Low-implanted large toes
- Foot deformities
- Talus valgus
SKIN, NAILS, & HAIR
Skin
- Dry skin
NEUROLOGIC
Central Nervous System
- Global developmental delay
- Impaired intellectual development
- Speech delay
- Delayed walking
- Axial hypotonia
- Peripheral hypertonia
- Learning difficulties
- Cerebral atrophy seen on brain imaging
- Delayed myelination
Behavioral Psychiatric Manifestations
- Behavioral abnormalities (in some patients)
- Aggression
- Stereotypies
- Autism spectrum disorder
MISCELLANEOUS
- Onset in utero
- Variable phenotype
- Variable severity
- Facial dysmorphism changes over time
- De novo deletion or point mutation
- One patient with a point mutation in the EPB41L1 gene has been reported (602879.0001)
MOLECULAR BASIS
- Contiguous gene deletion syndrome of chromosome 20q11.2-q12
Intellectual developmental disorder, autosomal dominant - PS156200 - 67 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.11 Coffin-Siris syndrome 2 AD 3 614607 ARID1A 603024
1q21.3 White-Sutton syndrome AD 3 616364 POGZ 614787
1q21.3 GAND syndrome AD 3 615074 GATAD2B 614998
1q22 Intellectual developmental disorder, autosomal dominant 52 AD 3 617796 ASH1L 607999
1q25.3 Intellectual developmental disorder, autosomal dominant 75 AD 3 620988 DHX9 603115
1q44 Intellectual developmental disorder, autosomal dominant 22 AD 3 612337 ZBTB18 608433
2p25.3 Intellectual developmental disorder, autosomal dominant 39 AD 3 616521 MYT1L 613084
2q11.2 ?Intellectual developmental disorder, autosomal dominant 69 AD 3 617863 LMAN2L 609552
2q23.1 Intellectual developmental disorder, autosomal dominant 1 AD 3 156200 MBD5 611472
3p25.3 Intellectual developmental disorder, autosomal dominant 23 AD 3 615761 SETD5 615743
3p21.31 Intellectual developmental disorder, autosomal dominant 70 AD 3 620157 SETD2 612778
3q22.3 Intellectual developmental disorder, autosomal dominant 47 AD 3 617635 STAG1 604358
3q26.32 Intellectual developmental disorder, autosomal dominant 41 AD 3 616944 TBL1XR1 608628
3q27.1 Intellectual developmental disorder 60 with seizures AD 3 618587 AP2M1 601024
4q31.1 Intellectual developmental disorder, autosomal dominant 50, with behavioral abnormalities AD 3 617787 NAA15 608000
5p15.2 Intellectual developmental disorder, autosomal dominant 63, with macrocephaly AD 3 618825 TRIO 601893
5p15.2 Intellectual developmental disorder, autosomal dominant 44, with microcephaly AD 3 617061 TRIO 601893
5q13.3 Intellectual developmental disorder, autosomal dominant 34 AD 3 616351 CERT1 604677
5q32 Intellectual developmental disorder, autosomal dominant 53 AD 3 617798 CAMK2A 114078
5q33.2 Intellectual developmental disorder, autosomal dominant 67 AD 3 619927 GRIA1 138248
6p21.32 Intellectual developmental disorder, autosomal dominant 5 AD 3 612621 SYNGAP1 603384
6q13 Intellectual developmental disorder, autosomal dominant 46 AD 3 617601 KCNQ5 607357
6q14.3 Intellectual developmental disorder, autosomal dominant 64 AD 3 619188 ZNF292 616213
6q22.1 Intellectual developmental disorder, autosomal dominant 55, with seizures AD 3 617831 NUS1 610463
6q24.2 Intellectual developmental disorder, autosomal dominant 43 AD 3 616977 HIVEP2 143054
6q25.3 Coffin-Siris syndrome 1 AD 3 135900 ARID1B 614556
7p22.1 Intellectual developmental disorder, autosomal dominant 48 AD 3 617751 RAC1 602048
7p13 Intellectual developmental disorder, autosomal dominant 54 AD 3 617799 CAMK2B 607707
7q11.22 Intellectual developmental disorder, autosomal dominant 26 AD 3 615834 KIAA0442 607270
7q36.2 Intellectual developmental disorder, autosomal dominant 33 AD 3 616311 DPP6 126141
9p24 Intellectual developmental disorder, autosomal dominant 2 AD 4 614113 MRD2 614113
9q34.11 Intellectual developmental disorder, autosomal dominant 58 AD 3 618106 SET 600960
9q34.3 Kleefstra syndrome 1 AD 3 610253 EHMT1 607001
10p15.3 Intellectual developmental disorder, autosomal dominant 30 AD 3 616083 ZMYND11 608668
10q22.2 Intellectual developmental disorder, autosomal dominant 59 AD 3 618522 CAMK2G 602123
11p15.5 Vulto-van Silfout-de Vries syndrome AD 3 615828 DEAF1 602635
11q13.1 Coffin-Siris syndrome 7 AD 3 618027 DPF2 601671
11q13.1-q13.2 Schuurs-Hoeijmakers syndrome AD 3 615009 PACS1 607492
11q13.2 Intellectual developmental disorder, autosomal dominant 51 AD 3 617788 KMT5B 610881
11q24.2 Intellectual developmental disorder, autosomal dominant 4 AD 2 612581 MRD4 612581
12p13.1 Intellectual developmental disorder, autosomal dominant 6, with or without seizures AD 3 613970 GRIN2B 138252
12q12 Coffin-Siris syndrome 6 AD 3 617808 ARID2 609539
12q13.12 Intellectual developmental disorder, autosomal dominant, FRA12A type AD 3 136630 DIP2B 611379
12q13.2 Coffin-Siris syndrome 8 AD 3 618362 SMARCC2 601734
12q21.33 Intellectual developmental disorder, autosomal dominant 66 AD 3 619910 ATP2B1 108731
14q11.2 Intellectual developmental disorder, autosomal dominant 74 AD 3 620688 HNRNPC 164020
15q21.3 Intellectual developmental disorder, autosomal dominant 71, with behavioral abnormalities AD 3 620330 RFX7 612660
16p13.3 Intellectual developmental disorder, autosomal dominant 72 AD 3 620439 SRRM2 606032
16q22.1 Intellectual developmental disorder, autosomal dominant 21 AD 3 615502 CTCF 604167
16q24.3 Intellectual developmental disorder, autosomal dominant 3 AD 3 612580 CDH15 114019
17p13.1 Intellectual developmental disorder, autosomal dominant 62 AD 3 618793 DLG4 602887
17q21.2 Coffin-Siris syndrome 5 AD 3 616938 SMARCE1 603111
17q21.31 Koolen-De Vries syndrome AD 3 610443 KANSL1 612452
17q23.1 Intellectual developmental disorder, autosomal dominant 56 AD 3 617854 CLTC 118955
17q23.2 Intellectual developmental disorder, autosomal dominant 61 AD 3 618009 MED13 603808
17q23.2 Intellectual developmental disorder, autosomal dominant 57 AD 3 618050 TLK2 608439
18q12.3 Intellectual developmental disorder, autosomal dominant 29 AD 3 616078 SETBP1 611060
19p13.3 Intellectual developmental disorder, autosomal dominant 65 AD 3 619320 KDM4B 609765
19p13.2 Coffin-Siris syndrome 4 AD 3 614609 SMARCA4 603254
19q13.12 Intellectual developmental disorder, autosomal dominant 68 AD 3 619934 KMT2B 606834
19q13.2 Intellectual developmental disorder, autosomal dominant 45 AD 3 617600 CIC 612082
20q11.23 ?Intellectual developmental disorder, autosomal dominant 11 AD 3 614257 EPB41L1 602879
20q13.33 Intellectual developmental disorder, autosomal dominant 73 AD 3 620450 TAF4 601796
20q13.33 Intellectual developmental disorder, autosomal dominant 38 AD 3 616393 EEF1A2 602959
21q22.13 Intellectual developmental disorder, autosomal dominant 7 AD 3 614104 DYRK1A 600855
22q11.23 Coffin-Siris syndrome 3 AD 3 614608 SMARCB1 601607
22q12.3 ?Intellectual developmental disorder, autosomal dominant 10 AD 3 614256 CACNG2 602911

TEXT

A number sign (#) is used with this entry because it represents a contiguous gene deletion syndrome on chromosome 20q11-q12. One patient with autosomal dominant intellectual development disorder-11 (MRD11) has been found to have a mutation in the EPB41L1 gene on chromosome 20q11.


Description

Chromosome 20q11-q12 deletion syndrome is characterized by global developmental delay, poor overall growth, sometimes with severe feeding difficulties, facial dysmorphism, and distal skeletal anomalies. Some patients may have hearing impairment, retinopathy, or cardiac defects. It is a multisystemic disorder with variable features (summary by Loddo et al., 2018).


Clinical Features

Chromosome 20q11-q12 Deletion Syndrome

Callier et al. (2006) reported a 4-year-old girl with intrauterine growth retardation, severe feeding difficulties requiring enteral feeding, hypertonia, and global developmental delay. She walked at age 30 months, but was nonverbal and showed behavioral abnormalities, including aggression, stereotypies, and head-banging. Facial dysmorphic features included a triangular face with large forehead and frontal bossing, plagiocephaly, downslanting palpebral fissures, hypertelorism, strabismus, thin nose with hypoplastic alae nasi and long columella, low-set ears, well-defined philtrum, thin lips, and microretrognathia. Other features included dry skin, fifth finger clinodactyly, and low-implanted large toes. Brain imaging showed cortical atrophy.

Posmyk et al. (2014) reported a 2-year-old Polish girl with 20q11 deletion syndrome. She had pre- and post-natal growth retardation, severe feeding problems necessitating tube feeding, hypotonia, and respiratory distress. She also had cleft palate, patent foramen ovale, hypertrophic cardiomyopathy, unilateral preaxial polydactyly, gastroesophageal reflux, and peripheral hypertonia. Craniofacial features noted in infancy included microcephaly, sloping forehead, round face, arched eyebrows, narrow palpebral fissures, widely spaced eyes, wide and prominent nasal bridge, long nasal ridge, broad nasal tip, microretrognathia, deep chin groove, and low-set abnormal ears. Ophthalmologic examination showed strabismus, astigmatism, hyperopia, and retinal pigmentary abnormalities. By age 12 months, the face became triangular with high forehead and sparse hair. She had epicanthal folds, long and prominent philtrum, thin lips, and protruding ears. She had severely impaired intellectual development with poor language and inability to walk independently.

Jedraszak et al. (2015) reported 6 unrelated patients, ranging in age from 2 months to 20 years, with global developmental delay, dysmorphic facial features, and distal skeletal anomalies associated with de novo heterozygous interstitial deletions on chromosome 20q11.2. Five patients had neonatal feeding difficulties, and 2 patients each had intrauterine growth retardation, cardiac defects, ocular anomalies, hearing impairment, and abnormal brain imaging, such as cortical atrophy or delayed myelination. Dysmorphic facial features changed somewhat with time: at first, patients tended to show microretrognathia with short philtrum, but later both disappeared and the patients developed midface hypoplasia, high forehead, frontal bossing, deep-set eyes, and hypertelorism. Other features included ear hypoplastic alae nasi, long columella, and abnormal ears. The patients had variable distal skeletal defects, such as brachydactyly, clinodactyly, camptodactyly, talus valgus, and adducted thumbs. The patients had variably impaired intellectual development with poor speech and language. A few patients were able to attend special schools but had difficulties; at least 1 patient had autism spectrum disorder.

Loddo et al. (2018) reported a 5-year-old girl with 20q11-q12 deletion syndrome. She had poor growth with microcephaly, mild developmental delay with poor speech, and submucosal cleft palate that was surgically repaired. Dysmorphic features included flat face, high forehead, arched eyebrows, deep-set eyes, hypertelorism, epicanthal folds, wide nasal base with underdeveloped alae nasi, thin upper lip, and prognathism. She also had distal skeletal anomalies of the hands and feet, namely brachydactyly and clinodactyly.

Intellectual Developmental Disorder, Autosomal Dominant 11

Hamdan et al. (2011) reported a 6-year-old boy with hypotonia and severely impaired intellectual development. He did not have seizures; brain imaging was normal.


Cytogenetics

Callier et al. (2006) identified a de novo heterozygous 6.6-Mb interstitial deletion on chromosome 20q11.22-q11.23 in a 4-year-old girl with developmental delay, severe feeding difficulties, and dysmorphic features. The deleted region included at least 88 genes.

In a 2-year-old Polish girl with developmental delay and dysmorphic features, Posmyk et al. (2014) identified a de novo heterozygous 5.9-Mb interstitial deletion on chromosome 20q11.21-q11.23. The deleted region contained 87 known genes.

In 6 unrelated patients with a similar neurodevelopmental disorder, Jedraszak et al. (2015) used array CGH to identify de novo heterozygous deletions of chromosome 20q11.2, with sizes ranging from 2.24 Mb to 7.7 Mb. The minimal critical region could be narrowed to 1.62 Mb. The authors suggested that the loss of 3 genes, EPB41L1 (602879), SAMHD1 (606754), and GDF5 (601146), may be responsible for certain phenotypic aspects. However, the deletion in patient 5 did not include EPB41L1 or SAMHD1, and the deletion in patient 6 did not include GDF5. The authors noted that patient 5 had a somewhat milder phenotype.

In a 5-year-old girl with developmental delay and dysmorphic features, Loddo et al. (2018) identified low-level mosaicism for a 7.5-Mb deletion on chromosome 20q11.2-q12, including the 1.6-Mb critical region identified by Jedraszak et al. (2015). The deletion in this patient involved 72 genes. The authors suggested that loss of GDF5 may contribute to the skeletal anomalies and that loss of EPB41L1 may contribute to the neurologic features. Involvement of GHRH (139190) was also postulated, possibly contributing to growth retardation.


Inheritance

The heterozygous deletions of chromosome 20q11.2 that were identified in patients with a similar neurodevelopmental disorder by Jedraszak et al. (2015) occurred de novo.

The heterozygous mutation in the EPB41L1 gene that was identified in a patient with MRD11 by Hamdan et al. (2011) occurred de novo.


Molecular Genetics

In a patient with intellectual developmental disorder 11, Hamdan et al. (2011) identified a de novo heterozygous missense mutation in the EPB41L1 gene (P854S; 602879.0001) on chromosome 20q11.2-q12. The mutation affects a highly conserved proline in the C-terminal domain of the 4.1N protein, which binds AMPA receptor subunits. Coimmunoprecipitation studies showed that the proline-to-serine substitution at codon 854 reduces the binding of 4.1N to GLUR1 (138248) by 50% in HEK293 cells. Moreover, insertion of GLUR1 at the synaptic membrane was significantly decreased in transfected hippocampal neurons producing mutant 4.1N when compared to cells producing wildtype 4.1N. The patient was part of a cohort of 95 sporadic cases of nonsyndromic intellectual disability who underwent sequencing of a targeted panel of genes involved in glutamate receptor function.


REFERENCES

  1. Callier, P., Faivre, L., Marle, N., Thauvin-Robinet, C., Sanlaville, D., Gosset, P., Prieur, M., Labenne, M., Huet, F., Mugneret, F. Major feeding difficulties in the first reported case of interstitial 20q11.22-q12 microdeletion and molecular cytogenetic characterization. Am. J. Med. Genet. 140A: 1859-1863, 2006. [PubMed: 16892304, related citations] [Full Text]

  2. Hamdan, F. F., Gauthier, J., Araki, Y., Lin, D.-T., Yoshizawa, Y., Higashi, K., Park, A.-R., Spiegelman, D., Dobrzeniecka, S., Piton, A., Tomitori, H., Daoud, H., and 22 others. Excess of de novo deleterious mutations in genes associated with glutamatergic systems in nonsyndromic intellectual disability. Am. J. Hum. Genet. 88: 306-316, 2011. Note; Erratum: Am. J. Hum. Genet. 88: 516 only, 2011. [PubMed: 21376300, images, related citations] [Full Text]

  3. Jedraszak, G., Demeer, B., Mathieu-Dramard, M., Andrieux, J., Receveur, A., Weber, A., Maye, U., Foulds, N., Temple, I. K., Crolla, J., Alex-Cordier, M.-P., Sanlaville, D., Ewans, L., Wilson, M., Armstrong, R., Clarkson, A., Copin, H., Morin, G. Clinical and molecular characterization of the 20q11.2 microdeletion syndrome: six new patients. Am. J. Med. Genet. 167A: 504-511, 2015. [PubMed: 25572454, related citations] [Full Text]

  4. Loddo, S., Alesi, V., Genovese, S., Orlando, V., Calacci, C., Restaldi, F., Pompili, D., Liambo, M. T., Digilio, M. C., Dallapiccola, B., Dentici, M. L., Novelli, A. First report of low-rate mosaicism for 20q11.21q12 deletion and delineation of the associated disorder. Cytogenet. Genome Res. 156: 87-94, 2018. [PubMed: 30372694, related citations] [Full Text]

  5. Posmyk, R., Lesniewicz, R., Gogiel, M., Chorazy, M., Bakunowicz, A., Sielicka, D., Vermeesch, J., Nowakowska, B. A. The smallest de novo deletion of 20q11.21-q11.23 in a girl with feeding problems, retinal dysplasia, and skeletal abnormalities. Am. J. Med. Genet. 164A: 1056-1061, 2014. [PubMed: 24459047, related citations] [Full Text]


Contributors:
Cassandra L. Kniffin - updated : 06/07/2021
Creation Date:
Ada Hamosh : 9/28/2011
joanna : 09/10/2024
joanna : 11/14/2023
carol : 06/11/2021
carol : 06/10/2021
ckniffin : 06/07/2021
carol : 02/16/2019
carol : 03/05/2014
terry : 7/6/2012
alopez : 10/3/2011

# 614257

CHROMOSOME 20q11-q12 DELETION SYNDROME


Other entities represented in this entry:

INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 11, INCLUDED; MRD11, INCLUDED
MENTAL RETARDATION, AUTOSOMAL DOMINANT 11, INCLUDED

ORPHA: 178469;   DO: 0070041;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
20q11.23 ?Intellectual developmental disorder, autosomal dominant 11 614257 Autosomal dominant 3 EPB41L1 602879

TEXT

A number sign (#) is used with this entry because it represents a contiguous gene deletion syndrome on chromosome 20q11-q12. One patient with autosomal dominant intellectual development disorder-11 (MRD11) has been found to have a mutation in the EPB41L1 gene on chromosome 20q11.


Description

Chromosome 20q11-q12 deletion syndrome is characterized by global developmental delay, poor overall growth, sometimes with severe feeding difficulties, facial dysmorphism, and distal skeletal anomalies. Some patients may have hearing impairment, retinopathy, or cardiac defects. It is a multisystemic disorder with variable features (summary by Loddo et al., 2018).


Clinical Features

Chromosome 20q11-q12 Deletion Syndrome

Callier et al. (2006) reported a 4-year-old girl with intrauterine growth retardation, severe feeding difficulties requiring enteral feeding, hypertonia, and global developmental delay. She walked at age 30 months, but was nonverbal and showed behavioral abnormalities, including aggression, stereotypies, and head-banging. Facial dysmorphic features included a triangular face with large forehead and frontal bossing, plagiocephaly, downslanting palpebral fissures, hypertelorism, strabismus, thin nose with hypoplastic alae nasi and long columella, low-set ears, well-defined philtrum, thin lips, and microretrognathia. Other features included dry skin, fifth finger clinodactyly, and low-implanted large toes. Brain imaging showed cortical atrophy.

Posmyk et al. (2014) reported a 2-year-old Polish girl with 20q11 deletion syndrome. She had pre- and post-natal growth retardation, severe feeding problems necessitating tube feeding, hypotonia, and respiratory distress. She also had cleft palate, patent foramen ovale, hypertrophic cardiomyopathy, unilateral preaxial polydactyly, gastroesophageal reflux, and peripheral hypertonia. Craniofacial features noted in infancy included microcephaly, sloping forehead, round face, arched eyebrows, narrow palpebral fissures, widely spaced eyes, wide and prominent nasal bridge, long nasal ridge, broad nasal tip, microretrognathia, deep chin groove, and low-set abnormal ears. Ophthalmologic examination showed strabismus, astigmatism, hyperopia, and retinal pigmentary abnormalities. By age 12 months, the face became triangular with high forehead and sparse hair. She had epicanthal folds, long and prominent philtrum, thin lips, and protruding ears. She had severely impaired intellectual development with poor language and inability to walk independently.

Jedraszak et al. (2015) reported 6 unrelated patients, ranging in age from 2 months to 20 years, with global developmental delay, dysmorphic facial features, and distal skeletal anomalies associated with de novo heterozygous interstitial deletions on chromosome 20q11.2. Five patients had neonatal feeding difficulties, and 2 patients each had intrauterine growth retardation, cardiac defects, ocular anomalies, hearing impairment, and abnormal brain imaging, such as cortical atrophy or delayed myelination. Dysmorphic facial features changed somewhat with time: at first, patients tended to show microretrognathia with short philtrum, but later both disappeared and the patients developed midface hypoplasia, high forehead, frontal bossing, deep-set eyes, and hypertelorism. Other features included ear hypoplastic alae nasi, long columella, and abnormal ears. The patients had variable distal skeletal defects, such as brachydactyly, clinodactyly, camptodactyly, talus valgus, and adducted thumbs. The patients had variably impaired intellectual development with poor speech and language. A few patients were able to attend special schools but had difficulties; at least 1 patient had autism spectrum disorder.

Loddo et al. (2018) reported a 5-year-old girl with 20q11-q12 deletion syndrome. She had poor growth with microcephaly, mild developmental delay with poor speech, and submucosal cleft palate that was surgically repaired. Dysmorphic features included flat face, high forehead, arched eyebrows, deep-set eyes, hypertelorism, epicanthal folds, wide nasal base with underdeveloped alae nasi, thin upper lip, and prognathism. She also had distal skeletal anomalies of the hands and feet, namely brachydactyly and clinodactyly.

Intellectual Developmental Disorder, Autosomal Dominant 11

Hamdan et al. (2011) reported a 6-year-old boy with hypotonia and severely impaired intellectual development. He did not have seizures; brain imaging was normal.


Cytogenetics

Callier et al. (2006) identified a de novo heterozygous 6.6-Mb interstitial deletion on chromosome 20q11.22-q11.23 in a 4-year-old girl with developmental delay, severe feeding difficulties, and dysmorphic features. The deleted region included at least 88 genes.

In a 2-year-old Polish girl with developmental delay and dysmorphic features, Posmyk et al. (2014) identified a de novo heterozygous 5.9-Mb interstitial deletion on chromosome 20q11.21-q11.23. The deleted region contained 87 known genes.

In 6 unrelated patients with a similar neurodevelopmental disorder, Jedraszak et al. (2015) used array CGH to identify de novo heterozygous deletions of chromosome 20q11.2, with sizes ranging from 2.24 Mb to 7.7 Mb. The minimal critical region could be narrowed to 1.62 Mb. The authors suggested that the loss of 3 genes, EPB41L1 (602879), SAMHD1 (606754), and GDF5 (601146), may be responsible for certain phenotypic aspects. However, the deletion in patient 5 did not include EPB41L1 or SAMHD1, and the deletion in patient 6 did not include GDF5. The authors noted that patient 5 had a somewhat milder phenotype.

In a 5-year-old girl with developmental delay and dysmorphic features, Loddo et al. (2018) identified low-level mosaicism for a 7.5-Mb deletion on chromosome 20q11.2-q12, including the 1.6-Mb critical region identified by Jedraszak et al. (2015). The deletion in this patient involved 72 genes. The authors suggested that loss of GDF5 may contribute to the skeletal anomalies and that loss of EPB41L1 may contribute to the neurologic features. Involvement of GHRH (139190) was also postulated, possibly contributing to growth retardation.


Inheritance

The heterozygous deletions of chromosome 20q11.2 that were identified in patients with a similar neurodevelopmental disorder by Jedraszak et al. (2015) occurred de novo.

The heterozygous mutation in the EPB41L1 gene that was identified in a patient with MRD11 by Hamdan et al. (2011) occurred de novo.


Molecular Genetics

In a patient with intellectual developmental disorder 11, Hamdan et al. (2011) identified a de novo heterozygous missense mutation in the EPB41L1 gene (P854S; 602879.0001) on chromosome 20q11.2-q12. The mutation affects a highly conserved proline in the C-terminal domain of the 4.1N protein, which binds AMPA receptor subunits. Coimmunoprecipitation studies showed that the proline-to-serine substitution at codon 854 reduces the binding of 4.1N to GLUR1 (138248) by 50% in HEK293 cells. Moreover, insertion of GLUR1 at the synaptic membrane was significantly decreased in transfected hippocampal neurons producing mutant 4.1N when compared to cells producing wildtype 4.1N. The patient was part of a cohort of 95 sporadic cases of nonsyndromic intellectual disability who underwent sequencing of a targeted panel of genes involved in glutamate receptor function.


REFERENCES

  1. Callier, P., Faivre, L., Marle, N., Thauvin-Robinet, C., Sanlaville, D., Gosset, P., Prieur, M., Labenne, M., Huet, F., Mugneret, F. Major feeding difficulties in the first reported case of interstitial 20q11.22-q12 microdeletion and molecular cytogenetic characterization. Am. J. Med. Genet. 140A: 1859-1863, 2006. [PubMed: 16892304] [Full Text: https://doi.org/10.1002/ajmg.a.31395]

  2. Hamdan, F. F., Gauthier, J., Araki, Y., Lin, D.-T., Yoshizawa, Y., Higashi, K., Park, A.-R., Spiegelman, D., Dobrzeniecka, S., Piton, A., Tomitori, H., Daoud, H., and 22 others. Excess of de novo deleterious mutations in genes associated with glutamatergic systems in nonsyndromic intellectual disability. Am. J. Hum. Genet. 88: 306-316, 2011. Note; Erratum: Am. J. Hum. Genet. 88: 516 only, 2011. [PubMed: 21376300] [Full Text: https://doi.org/10.1016/j.ajhg.2011.02.001]

  3. Jedraszak, G., Demeer, B., Mathieu-Dramard, M., Andrieux, J., Receveur, A., Weber, A., Maye, U., Foulds, N., Temple, I. K., Crolla, J., Alex-Cordier, M.-P., Sanlaville, D., Ewans, L., Wilson, M., Armstrong, R., Clarkson, A., Copin, H., Morin, G. Clinical and molecular characterization of the 20q11.2 microdeletion syndrome: six new patients. Am. J. Med. Genet. 167A: 504-511, 2015. [PubMed: 25572454] [Full Text: https://doi.org/10.1002/ajmg.a.36882]

  4. Loddo, S., Alesi, V., Genovese, S., Orlando, V., Calacci, C., Restaldi, F., Pompili, D., Liambo, M. T., Digilio, M. C., Dallapiccola, B., Dentici, M. L., Novelli, A. First report of low-rate mosaicism for 20q11.21q12 deletion and delineation of the associated disorder. Cytogenet. Genome Res. 156: 87-94, 2018. [PubMed: 30372694] [Full Text: https://doi.org/10.1159/000493935]

  5. Posmyk, R., Lesniewicz, R., Gogiel, M., Chorazy, M., Bakunowicz, A., Sielicka, D., Vermeesch, J., Nowakowska, B. A. The smallest de novo deletion of 20q11.21-q11.23 in a girl with feeding problems, retinal dysplasia, and skeletal abnormalities. Am. J. Med. Genet. 164A: 1056-1061, 2014. [PubMed: 24459047] [Full Text: https://doi.org/10.1002/ajmg.a.36394]


Contributors:
Cassandra L. Kniffin - updated : 06/07/2021

Creation Date:
Ada Hamosh : 9/28/2011

Edit History:
joanna : 09/10/2024
joanna : 11/14/2023
carol : 06/11/2021
carol : 06/10/2021
ckniffin : 06/07/2021
carol : 02/16/2019
carol : 03/05/2014
terry : 7/6/2012
alopez : 10/3/2011